Stem-loop mtr-MIR5205c

Accession

MI0018242

Description

Medicago truncatula mtr-MIR5205c precursor miRNA

Literature search

1 open access papers mention mtr-MIR5205c
(1 sentences)

Sequence

aaaaggguCUUAUAAUUAGGGACGGAGGUAGUauugauuggacggcuacugaugaucugaaugcaugacaugaauacauuuuuuucuuugacauuaacaaauccuguggccguuucucuuugucuuuuauuauguuagcccguuucccuc
....((((..((((((.(((((((((((...........((((((((((.(((......((((((......(((.....)))......)).)))).....)))..)))))))))).))))))))))).))))))...)))).........

Structure

-----aaaa    -CU      U           UAGUauugauu          -u   gaucug    -  ugacau   u 
         gggu   UAUAAU AGGGACGGAGG           ggacggcuac  gau      aaug ca      gaa a
         ||||   |||||| |||||||||||           ||||||||||  |||      |||| ||      ||| c
         cccg   guauua uuucuguuucu           uuugccggug  cua      uuac gu      uuu a
cucccuuug    auu      u           ----------c          uc   -aacaa    a  uucuuu   u 

Annotation confidence Not enough data

Genome context

chr6: 8755342-8755491 [-]

Mature mtr-miR5205c

• Accession: MIMAT0021135
• Description: Medicago truncatula mtr-miR5205c mature miRNA
• Sequence: 9 - CUUAUAAUUAGGGACGGAGGUAGU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010