Stem-loop ssp-MIR528

Accession

MI0018188

Description

Saccharum sp. ssp-MIR528 precursor miRNA

Literature search

1 open access papers mention ssp-MIR528
(2 sentences)

Sequence

UGGAAGGGGCAUGCAGAGGAGcacgaggcuuggcuaaaagccgaccugugcuaugcuaccccucgcuggcucuccugugccugccucuucca
(((((((((((.(((.((((((((.(((.((((((...))))))))))))))..((((........))))...))).))).)))))))))))

Structure

           U   G   ---------------------     g   c      a 
UGGAAGGGGCA GCA AGG                     AGcac agg uuggcu  
||||||||||| ||| |||                     ||||| ||| |||||| a
accuucuccgu cgu ucc                     ucgug ucc agccga  
           c   g   ucucggucgcuccccaucgua     -   -      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR528

• Accession: MIMAT0020288
• Description: Saccharum sp. ssp-miR528 mature miRNA
• Sequence: 1 - UGGAAGGGGCAUGCAGAGGAG - 21
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260