Stem-loop rgl-MIR5141

Accession

MI0018053

Description

Rehmannia glutinosa rgl-MIR5141 precursor miRNA

Sequence

uugaguaaugccugagucgcagcaucaaggucugagccaaauugagcaaaggcggccacuucgcgauauugugccaauuccaguuuugaacuaccgcauacuuguuucauagcuuucaacugagcggcAGACCCGACGCGACUGACAGAUAAgccgacguua
...........(((((((((....((..((((((.(((((((((.(((...((((.....)))).......))))))))..((((.((((.....(((....))))))).))))......)).))..)))))).)).))))))..)))..............

Structure

---uugaguaaugc   --      agca  aa      -a  -  -----------------------------------------     a   ----aag    c 
              cug  agucgc    uc  ggucug  gc ca                                         aauug gca       gcgg c
              |||  ||||||    ||  ||||||  || ||                                         ||||| |||       |||| a
              GAC  UCAGCG    AG  CCAGAc  cg gu                                         uuaac cgu       cgcu c
auugcagccgAAUA   AG      ---C  -C      gg  a  caacuuucgauacuuuguucauacgccaucaaguuuugacc     -   guuauag    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature rgl-miR5141

• Accession: MIMAT0020652
• Description: Rehmannia glutinosa rgl-miR5141 mature miRNA
• Sequence: 129 - AGACCCGACGCGACUGACAGAUAA - 152
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21439075
   Differential miRNA expression in Rehmannia glutinosa plants subjected to continuous cropping
   Yang Y, Chen X, Chen J, Xu H, Li J, Zhang Z
   BMC Plant Biol (2011) 11:53