Stem-loop rgl-MIR5139

Accession

MI0018051

Description

Rehmannia glutinosa rgl-MIR5139 precursor miRNA

Sequence

aguuauaucaAAACCUGGCUCUGAUACCAagaggaauugaugaucuuuauucaugaaaagagagaacuauauauagauauacaacgauaugucgaagacgaaauuuuuaucucaauaugggguuauuagaccaacuuuggguggca
.(((((.(((((...(((.(((((((((........((.((((.......)))).)).........((((((..(((((..........((((...)))).......)))))..)))))))).))))))))))..)))))))))).

Structure

a     a     ACC   C       -  Aagaggaauugaugaucuuuauucaugaaaagagagaa      au     uacaacgaua    g 
 guuau ucaAA   UGG UCUGAUA CC                                      cuauau  agaua          uguc  
 ||||| |||||   ||| ||||||| ||                                      ||||||  |||||          |||| a
 cggug gguuu   acc agauuau gg                                      gguaua  ucuau          gcag  
a     -     -ca   -       u  --------------------------------------      ac     ---uuuuaaa    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature rgl-miR5139

• Accession: MIMAT0020650
• Description: Rehmannia glutinosa rgl-miR5139 mature miRNA
• Sequence: 11 - AAACCUGGCUCUGAUACCA - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21439075
   Differential miRNA expression in Rehmannia glutinosa plants subjected to continuous cropping
   Yang Y, Chen X, Chen J, Xu H, Li J, Zhang Z
   BMC Plant Biol (2011) 11:53