miRBase entry: mmu-mir-5132

Stem-loop mmu-mir-5132


Accession
MI0018044
Symbol
MGI: Mir5132
Description
Mus musculus mmu-mir-5132 precursor miRNA mir-5132
Gene
family?
RF03586; mir-5132

Literature search
3 open access papers mention mmu-mir-5132
(5 sentences)

Sequence

650 reads, 17 reads per million, 72 experiments
caggccgGCGUGGGGUGGUGGACUCAGGcuucuggagcugaagcCUGAUGUUCCCCAUCCCGCAGcggccu
.((((((..(((((((((.(((((((((((((.......))))))))).)))).)))))))))..))))))

Structure
c      GC         U    -         ug 
 aggccg  GUGGGGUGG GGAC UCAGGcuuc  g
 ||||||  ||||||||| |||| |||||||||  a
 uccggc  CGCCCUACC CUUG AGUCcgaag  g
-      GA         C    U         uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 74023528-74023598 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-5132
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-5132-5p

Accession MIMAT0020643
Description Mus musculus mmu-miR-5132-5p mature miRNA
Sequence 8 - GCGUGGGGUGGUGGACUCAGG - 28
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-5132-3p

Accession MIMAT0022988
Description Mus musculus mmu-miR-5132-3p mature miRNA
Sequence 45 - CUGAUGUUCCCCAUCCCGCAG - 65
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349