miRBase entry: mmu-mir-5116

Stem-loop mmu-mir-5116


Accession
MI0018025
Symbol
MGI: Mir5116
Description
Mus musculus mmu-mir-5116 precursor miRNA

Literature search
1 open access papers mention mmu-mir-5116
(1 sentences)

Sequence

100 reads, 8 reads per million, 35 experiments
auUUUGAUAGGAACCCCGCCUGAugcuuuuugguuuguuucaggcagggucuucauaucgaga
.(((((((((((((((.((((((.((..........)).)))))).)))).))).))))))))

Structure
a        -   -    C      u  uuuu 
 uUUUGAUA GGA ACCC GCCUGA gc    u
 |||||||| ||| |||| |||||| ||     
 agagcuau cuu uggg cggacu ug    g
-        a   c    a      u  uuug 


Annotation confidence Not enough data
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Genome context
chrX: 56587852-56587914 [-]

Database links

Mature mmu-miR-5116

Accession MIMAT0020624
Description Mus musculus mmu-miR-5116 mature miRNA
Sequence 3 - UUUGAUAGGAACCCCGCCUGA - 23
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349