miRBase entry: mmu-mir-5100

Stem-loop mmu-mir-5100


Accession
MI0018008
Symbol
MGI: Mir5100
Description
Mus musculus mmu-mir-5100 precursor miRNA

Literature search
5 open access papers mention mmu-mir-5100
(13 sentences)

Sequence

13063 reads, 118 reads per million, 95 experiments
gugggagggaggacuugggaacugaagagcagaguUCGAAUCCCAGCGGUGCCUCUucccgacu
.(((((((.(((((((((((..((((........))))..)))))..))).))))))))))...

Structure
--g       g   -   --     ac    gag 
   ugggagg agg acu  uggga  ugaa   c
   ||||||| ||| |||  |||||  ||||    
   gcccuUC UCC UGG  ACCCU  GCUu   a
uca       -   G   CG     AA    gag 


Annotation confidence Not enough data
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Genome context
chr11: 60728663-60728726 [+]

Database links

Mature mmu-miR-5100

Accession MIMAT0020607
Description Mus musculus mmu-miR-5100 mature miRNA
Sequence 36 - UCGAAUCCCAGCGGUGCCUCU - 56
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349