Stem-loop ssc-mir-429

Accession

MI0017991

Description

Sus scrofa ssc-mir-429 precursor miRNA

Literature search

3 open access papers mention ssc-mir-429
(6 sentences)

Sequence

3 reads, 6 reads per million, 2 experiments

gccgccgaugggugucuuaccaggcacgguuagaucugguucuucugucUAAUACUGUCUGGUAAUGCCGUccauucccgg
.(((..((((((((.(((((((((((..(((((((..((....)).)))))))..)))))))))).).))))))))..)))

Structure

g   cc        u -          cg       cu  u 
 ccg  gaugggug c uuaccaggca  guuagau  gg u
 |||  |||||||| | ||||||||||  |||||||  ||  
 ggc  uuaccUGC G AAUGGUCUGU  UAAUcug  cu c
-   cc        C U          CA       -u  u 

Annotation confidence Not enough data

Genome context

chr6: 58044174-58044254 [-]

Mature ssc-miR-429

• Accession: MIMAT0020591
• Description: Sus scrofa ssc-miR-429 mature miRNA
• Sequence: 50 - UAAUACUGUCUGGUAAUGCCGU - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100