Stem-loop gma-MIR319f

Accession

MI0017844

Description

Glycine max gma-MIR319f precursor miRNA

Literature search

18 open access papers mention gma-MIR319f
(45 sentences)

Sequence

688919 reads, 2496.0 reads per million, 176 experiments

aauuaagguggucugcuucugAUCCAACGAUGCGGGAGCUGCauuuagucgugacugucacgucUUGGACUGAAGGGGCCUCUUCauuucccaua
.....(((.(((((.((((.(.(((((.((((.((.((.(((........))).)).)).)))))))))).))))))))).)))...........

Structure

------aauua   u     g    u A     C    C  G  C   auu 
           agg ggucu cuuc g UCCAA GAUG GG AG UGC   u
           ||| ||||| |||| | ||||| |||| || || |||    
           UUC CCGGG GAAG C AGGUU cugc cu uc gug   a
auacccuuuaC   U     -    U -     -    a  g  a   cug 

Annotation confidence Low

Genome context

chr10: 48913063-48913157 [-]

Mature gma-miR319f-5p

• Accession: MIMAT0054188
• Description: Glycine max gma-miR319f-5p mature miRNA
• Sequence: 22 - AUCCAACGAUGCGGGAGCUGC - 42
• Evidence: experimental ; unknown

Mature gma-miR319f-3p

• Accession: MIMAT0020994
• Description: Glycine max gma-miR319f-3p mature miRNA
• Sequence: 65 - UUGGACUGAAGGGGCCUCUUC - 85
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506