Stem-loop gma-MIR171f

Accession

MI0017840

Description

Glycine max gma-MIR171f precursor miRNA

Literature search

15 open access papers mention gma-MIR171f
(36 sentences)

Sequence

163999 reads, 791.0 reads per million, 178 experiments

gAGAUAUUGGUACGGUUCAAUCagaaggcagugcuuuaugauuucaaagcucucuuauuugaUUGAGCCGUGCCAAUAUCACaugcaaac
..((((((((((((((((((((((((((.((.(((((........))))).))))).)))))))))))))))))))))))..........

Structure

--------gA                       -   c  u     aug 
          GAUAUUGGUACGGUUCAAUCaga agg ag gcuuu   a
          ||||||||||||||||||||||| ||| || |||||    
          CUAUAACCGUGCCGAGUUaguuu uuc uc cgaaa   u
caaacguaCA                       a   -  u     cuu 

Annotation confidence High

Genome context

chr15: 8505075-8505164 [-]

Mature gma-miR171f-5p

• Accession: MIMAT0054184
• Description: Glycine max gma-miR171f-5p mature miRNA
• Sequence: 2 - AGAUAUUGGUACGGUUCAAUC - 22
• Evidence: experimental ; unknown

Mature gma-miR171f-3p

• Accession: MIMAT0020990
• Description: Glycine max gma-miR171f-3p mature miRNA
• Sequence: 63 - UUGAGCCGUGCCAAUAUCAC - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506