Stem-loop emu-mir-124a

Accession

MI0017809

Description

Echinococcus multilocularis emu-mir-124a precursor miRNA

Sequence

ugucaagcacgugaaaugGCGUUCAACCUCGGAGCCUUUGUCagcgauugaauUAAGGCACGCGGUGAAUGCCAaaugcgaugcucc
.....(((((((....(((((((((.((.((..(((((..(((.....)))...))))).)).)))))))))))...))).))))..

Structure

uguca    -   gaaa         A  U  GA     -UG   g 
     agca cgu    ugGCGUUCA CC CG  GCCUU   UCa c
     |||| |||    ||||||||| || ||  |||||   ||| g
     ucgu gcg    ACCGUAAGU GG GC  CGGAA   agu a
---cc    a   -uaa         -  C  -A     Uua   u 

Annotation confidence Not enough data

Genome context

contig_60709: 660033-660119 [+]

Mature emu-miR-124a-3p

• Accession: MIMAT0020266
• Description: Echinococcus multilocularis emu-miR-124a-3p mature miRNA
• Sequence: 54 - UAAGGCACGCGGUGAAUGCCA - 74
• Evidence: experimental ; Illumina [2]

Mature emu-miR-124a-5p

• Accession: MIMAT0037444
• Description: Echinococcus multilocularis emu-miR-124a-5p mature miRNA
• Sequence: 19 - GCGUUCAACCUCGGAGCCUUUGUC - 42
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267