Stem-loop emu-mir-2a

Accession

MI0017799

Description

Echinococcus multilocularis emu-mir-2a precursor miRNA

Sequence

cuucgaaccucccuaCGUUCCAGGGGGAUGUGAGUUUauacagccuaugAAUCACAGCCCUGCUUGGAACCaaaggagcuuccu
....(((.((((....(((((((((((.(((((.((((((.....))))))))))).)))..))))))))....)))).)))..

Structure

cuuc   c    cuaC        --   A     G      c 
    gaa cucc    GUUCCAGG  GGG UGUGA UUUaua a
    ||| ||||    ||||||||  ||| ||||| |||||| g
    cuu gagg    CAAGGUUC  CCC ACACU AAguau c
--uc   c    aaaC        GU   G     -      c 

Annotation confidence Low

Genome context

scaffold_007760: 1900654-1900737 [+]

Mature emu-miR-2a-3p

• Accession: MIMAT0020255
• Description: Echinococcus multilocularis emu-miR-2a-3p mature miRNA
• Sequence: 50 - AAUCACAGCCCUGCUUGGAACC - 71
• Evidence: experimental ; Illumina [2]

Mature emu-miR-2a-5p

• Accession: MIMAT0037435
• Description: Echinococcus multilocularis emu-miR-2a-5p mature miRNA
• Sequence: 16 - CGUUCCAGGGGGAUGUGAGUUU - 37
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267