Stem-loop emu-mir-1

Accession

MI0017798

Description

Echinococcus multilocularis emu-mir-1 precursor miRNA

Sequence

gcuucccaauaggccauagaguaagucccuacaccuauggggaucuaUGGAAUGUUGUGAAGUAUGU
(((((.(((((..(((((((.....((((((......)))))))))))))..))))).)))))....

Structure

----     c     gg       guaag      ca 
    gcuuc caaua  ccauaga     ucccua  c
    ||||| |||||  |||||||     ||||||   
    UGAAG GUUGU  GGUaucu     aggggu  c
UGUA     U     AA       -----      au 

Annotation confidence Not enough data

Genome context

scaffold_007760: 1198289-1198355 [+]

Mature emu-miR-1-3p

• Accession: MIMAT0020254
• Description: Echinococcus multilocularis emu-miR-1-3p mature miRNA
• Sequence: 48 - UGGAAUGUUGUGAAGUAUGU - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267