Stem-loop egr-mir-190

Accession

MI0017789

Description

Echinococcus granulosus egr-mir-190 precursor miRNA

Gene family

MIPF0000076; mir-190

Literature search

1 open access papers mention egr-mir-190
(2 sentences)

Sequence

ucgacaaugAGAUAUGUUUGGGUUACUUGGUGcugugcucuauccucuuacaCCAGUGACCAAACAUAUUCacauuguu
..(((((((.(((((((((((.(((((.((((..................))))))))))))))))))))..)))))))

Structure

uc       -A           G     U    cugugcuc 
  gacaaug  GAUAUGUUUGG UUACU GGUG        u
  |||||||  ||||||||||| ||||| ||||         
  uuguuac  UUAUACAAACC AGUGA CCac        a
--       aC           -     -    auucuccu 

Annotation confidence Not enough data

Genome context

APAU02000055.1: 250953-251031 [-]

Mature egr-miR-190-5p

• Accession: MIMAT0020245
• Description: Echinococcus granulosus egr-miR-190-5p mature miRNA
• Sequence: 10 - AGAUAUGUUUGGGUUACUUGGUG - 32
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-190-3p

• Accession: MIMAT0037429
• Description: Echinococcus granulosus egr-miR-190-3p mature miRNA
• Sequence: 53 - CCAGUGACCAAACAUAUUC - 71
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83