Stem-loop egr-mir-2a

Accession

MI0017776

Description

Echinococcus granulosus egr-mir-2a precursor miRNA

Gene family

MIPF0000049; mir-2

Literature search

1 open access papers mention egr-mir-2a
(3 sentences)

Sequence

cuucgaaccucccuaCGUUCCAGGGGGAUGUGAGUUUAuacagccuaugAAUCACAGCCCUGCUUGGAACCaaaggagcuuccu
....(((.((((....(((((((((((.(((((.((((((.....))))))))))).)))..))))))))....)))).)))..

Structure

cuuc   c    cuaC        --   A     G      c 
    gaa cucc    GUUCCAGG  GGG UGUGA UUUAua a
    ||| ||||    ||||||||  ||| ||||| |||||| g
    cuu gagg    CAAGGUUC  CCC ACACU AAguau c
--uc   c    aaaC        GU   G     -      c 

Annotation confidence Not enough data

Genome context

APAU02000019.1: 574317-574400 [+]

Mature egr-miR-2a-3p

• Accession: MIMAT0020229
• Description: Echinococcus granulosus egr-miR-2a-3p mature miRNA
• Sequence: 50 - AAUCACAGCCCUGCUUGGAACC - 71
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-2a-5p

• Accession: MIMAT0037419
• Description: Echinococcus granulosus egr-miR-2a-5p mature miRNA
• Sequence: 16 - CGUUCCAGGGGGAUGUGAGUUUA - 38
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83