Stem-loop dme-mir-4986

Accession

MI0017772

Description

Drosophila melanogaster dme-mir-4986 precursor miRNA

Literature search

1 open access papers mention dme-mir-4986
(2 sentences)

Sequence

10 reads, 1 reads per million, 5 experiments

uucugccgcuuuugcuguggcuucucugcaUGGGAUUCCCCAUUCUGCAUGGCgccgaucucugccagcCCAUCGGAUGGCGGAACUUCCagugcagcgaggucgcuucucugcaggaucug
((((((.((....)).((((((((.((((((((((((((((((.(((.((((.((.(........).))))))))))))).)))).))))).))))).))))))))......))))))....

Structure

----      cgcuuuugcu        u     -     -    -    U   C    C  c auc 
    uucugc          guggcuuc cugca UGGGA UUCC CCAU CUG AUGG gc g   u
    ||||||          |||||||| ||||| ||||| |||| |||| ||| |||| || |    
    aggacg          cgcuggag gacgu aCCUU AAGG GGUA GGC UACC cg c   c
gucu      ----ucucuu        c     g     C    C    -   -    -  a cgu 

Annotation confidence Not enough data

Genome context

chr3L: 9733659-9733780 [-]

Mature dme-miR-4986-5p

• Accession: MIMAT0020223
• Description: Drosophila melanogaster dme-miR-4986-5p mature miRNA
• Sequence: 31 - UGGGAUUCCCCAUUCUGCAUGGC - 53
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4986-3p

• Accession: MIMAT0020224
• Description: Drosophila melanogaster dme-miR-4986-3p mature miRNA
• Sequence: 70 - CCAUCGGAUGGCGGAACUUCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215