Stem-loop dme-mir-4983

Accession

MI0017769

Description

Drosophila melanogaster dme-mir-4983 precursor miRNA

Sequence

24 reads, 3 reads per million, 11 experiments

ggcuggcugucuugaccCACUUGCUCGUUUGCAUUUCUGaaaaauguauacgcaaaaaccaaaaucaGAAAUUCUUUUGAGCAAGUGUGucaugaaauugccauucgu
((.((((..((.((((.((((((((((...(.((((((((.....((..........)).....)))))))).)...)))))))))).)))).))....)))).))..

Structure

--  c    --ug  u    c          UUU C        aaaau  auac 
  gg uggc    uc ugac CACUUGCUCG   G AUUUCUGa     gu    g
  || ||||    || |||| ||||||||||   | ||||||||     ||     
  cu accg    ag acuG GUGAACGAGU   C UAAAGacu     ca    c
ug  u    uuaa  u    U          UUU U        aaaac  aaaa 

Annotation confidence Not enough data

Genome context

chr2R: 19637414-19637521 [+]

Mature dme-miR-4983-5p

• Accession: MIMAT0020217
• Description: Drosophila melanogaster dme-miR-4983-5p mature miRNA
• Sequence: 18 - CACUUGCUCGUUUGCAUUUCUG - 39
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4983-3p

• Accession: MIMAT0020218
• Description: Drosophila melanogaster dme-miR-4983-3p mature miRNA
• Sequence: 68 - GAAAUUCUUUUGAGCAAGUGUG - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215