Stem-loop dme-mir-4975

Accession

MI0017761

Description

Drosophila melanogaster dme-mir-4975 precursor miRNA

Sequence

68 reads, 1 reads per million, 29 experiments

gggcaaauaaagcacguugcucccugUUUACUUGGGUUUUCUGUUCAuuucgccuaucgaacguugaacuuaaaaagccacgaucaguuguuuaacauacagauaucucug
((((((..........)))))).(((.((...(((.((((..(((((.((((.....))))...)))))...)))).))).)).)))............((((....))))

Structure

-gggcaaauaaagcacguugcucc   U  ACU   G    -CU     --u    c 
                        cug UU   UGG UUUU   GUUCA   uucg c
                        ||| ||   ||| ||||   |||||   |||| u
                        gac ag   acc aaaa   caagu   aagc a
gucucuauagacauacaauuuguu   u  --c   g    auu     ugc    u 

Annotation confidence Not enough data

Genome context

chr2R: 6707163-6707273 [-]

Mature dme-miR-4975-5p

• Accession: MIMAT0020205
• Description: Drosophila melanogaster dme-miR-4975-5p mature miRNA
• Sequence: 27 - UUUACUUGGGUUUUCUGUUCA - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215