Stem-loop dme-mir-4964

Accession

MI0017750

Description

Drosophila melanogaster dme-mir-4964 precursor miRNA

Sequence

10 reads, 2 reads per million, 8 experiments

auuuuugaaugguccuuuucaugcccaaggcgaauaaauauguauuuauguauauuuuuuuauaUGGUACGUAUUUAUUUGUCUGCAaauggcugccaaggagugcuacaua
..........(.(((((..((.(((..(((((((((((((((((((.(((((........))))))))))))))))))))))))......)))))..))))).)........

Structure

auuuuugaau g     uu  u   ----ca                   u     uau 
          g uccuu  ca gcc      aggcgaauaaauauguauu augua   u
          | |||||  || |||      ||||||||||||||||||| |||||    
          u aggaa  gu cgg      UCUGUUUAUUUAUGCAUGG Uauau   u
--auacaucg g     cc  -   uaaACG                   -     uuu 

Annotation confidence Not enough data

Genome context

chrX: 8965801-8965912 [+]

Mature dme-miR-4964-3p

• Accession: MIMAT0020187
• Description: Drosophila melanogaster dme-miR-4964-3p mature miRNA
• Sequence: 65 - UGGUACGUAUUUAUUUGUCUGCA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215