Stem-loop dme-mir-4950

Accession

MI0017736

Description

Drosophila melanogaster dme-mir-4950 precursor miRNA

Sequence

100 reads, 2 reads per million, 27 experiments

uaaugcacauaauAAAUGCCAACCAUUCAUCAUGAaauuauaaauaguaucaUUUCAAGAUGCAUGGUAAGGCUuuauuuuguuuugcaauc
...((((((.((((((.(((.(((((.((((.((((((.(((.....))).)))))).)))).)))))..))))))))).)))...)))...

Structure

uaa   ---   u      U   -A     U    A      u   a 
   ugc   aca aauAAA GCC  ACCAU CAUC UGAaau aua a
   |||   ||| |||||| |||  ||||| |||| |||||| ||| u
   acg   ugu uuauuU CGG  UGGUA GUAG ACUUUa uau a
cua   uuu   u      -   AA     C    A      c   g 

Annotation confidence Not enough data

Genome context

chr3R: 7451452-7451543 [+]

Mature dme-miR-4950-5p

• Accession: MIMAT0020162
• Description: Drosophila melanogaster dme-miR-4950-5p mature miRNA
• Sequence: 14 - AAAUGCCAACCAUUCAUCAUGA - 35
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4950-3p

• Accession: MIMAT0020163
• Description: Drosophila melanogaster dme-miR-4950-3p mature miRNA
• Sequence: 53 - UUUCAAGAUGCAUGGUAAGGCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215