Stem-loop dme-mir-4946

Accession

MI0017732

Description

Drosophila melanogaster dme-mir-4946 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

gcucgauugcugcaacuaagaaacaaaUAUUUUCAGUUGUUCAUUGCAaauuaauuuauguacauugcuaugaaaucaauugaaaauauaauuguauccuaggcuuaucagcugca
(((.(((....((..(((.((.((((((((((((((((((((((.((((...............)))).)))))..)))))))))))))..)))).)).)))))..))))))....

Structure

----   c   ugcu  aa   a  a    --             --     U    auuaau 
    gcu gau    gc  cua ga acaa  aUAUUUUCAGUUG  UUCAU GCAa      u
    ||| |||    ||  ||| || ||||  |||||||||||||  ||||| ||||      u
    cga cua    cg  gau cu uguu  uauaaaaguuaac  aagua cguu      a
acgu   -   --uu  --   c  a    aa             ua     u    acaugu 

Annotation confidence Not enough data

Genome context

chr2L: 18867046-18867161 [-]

Mature dme-miR-4946-5p

• Accession: MIMAT0020156
• Description: Drosophila melanogaster dme-miR-4946-5p mature miRNA
• Sequence: 28 - UAUUUUCAGUUGUUCAUUGCA - 48
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215