Stem-loop dme-mir-4945

Accession

MI0017731

Description

Drosophila melanogaster dme-mir-4945 precursor miRNA

Sequence

gugauggugcuggugguggugccuucauuguUUUUCUCUUCUUUUUGUUGUUugacuuuuacacuuuugaacaacaagccgaaaggaaaaagcaugaaggaaugcaaaguauucg
.....(((((((....)))))))(((((..(((((((.(((..((((((((((((...........))))))))))))..))).)))))))..))))).((((((...)))))).

Structure

gugauggugcuggugguggugcc     ug       C   UU            cuuu 
                       uucau  uUUUUCU UUC  UUUGUUGUUuga    u
                       |||||  ||||||| |||  ||||||||||||    a
                       aagua  aaaaagg aag  gaacaacaaguu    c
------gcuuaugaaacguaagg     cg       a   cc            uuca 

Annotation confidence Low

Genome context

chr3R: 11442192-11442306 [-]

Mature dme-miR-4945-5p

• Accession: MIMAT0020155
• Description: Drosophila melanogaster dme-miR-4945-5p mature miRNA
• Sequence: 32 - UUUUCUCUUCUUUUUGUUGUU - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215