Stem-loop dme-mir-4944

Accession

MI0017730

Description

Drosophila melanogaster dme-mir-4944 precursor miRNA

Literature search

1 open access papers mention dme-mir-4944
(2 sentences)

Sequence

aaaaguaacuuucguaaucgaaaaaguuucgcuuuuuUUUCUGCUUCUGCCGCUGAGCAaguuuuaaauauuaccgcUUAGUUACAGCUGCAGGAAGAAaaguuauaauuauggacuacguacauaaau
....(.((((((((....)))..))))).)((((((((((((((..(((..(((((((.................)))))))..)))..)))))))))))))).....(((((.........)))))..

Structure

aaaaguaacuuucguaaucgaaaaaguuuc              UU   CC       Aaguuuu 
                              gcuuuuuUUUCUGC  CUG  GCUGAGC       a
                              ||||||||||||||  |||  |||||||       a
                              ugaaAAGAAGGACG  GAC  UGAUUcg       a
----uaaauacaugcaucagguauuaauau              UC   AU       ccauuau 

Annotation confidence Not enough data

Genome context

chr3R: 10513005-10513133 [-]

Mature dme-miR-4944-5p

• Accession: MIMAT0020153
• Description: Drosophila melanogaster dme-miR-4944-5p mature miRNA
• Sequence: 38 - UUUCUGCUUCUGCCGCUGAGCA - 59
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4944-3p

• Accession: MIMAT0020154
• Description: Drosophila melanogaster dme-miR-4944-3p mature miRNA
• Sequence: 78 - UUAGUUACAGCUGCAGGAAGAA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215