Stem-loop dme-mir-4940

Accession

MI0017726

Description

Drosophila melanogaster dme-mir-4940 precursor miRNA

Sequence

59 reads, 2 reads per million, 19 experiments

uuaucgcaacuuaucgaucgggUGGCGGAUAUAGAUCAUUGGUUaucccuuaauuaaagcaAACAAGAUUUGUUUCGGCCGCCcgauuuuacauacaacgacacg
...(((.........(((((((((((.((.(((((((.(((......................)))))))))).)).)))))))))))..........)))....

Structure

-uua   -caacuuauc           G  U       A   GUUaucccuu 
    ucg          gaucgggUGGC GA AUAGAUC UUG          a
    |||          ||||||||||| || ||||||| |||           
    agc          uuagcCCGCCG CU UGUUUAG AAC          a
gcac   aacauacauu           G  U       -   AAacgaaauu 

Annotation confidence Not enough data

Genome context

chr3L: 9144593-9144697 [+]

Mature dme-miR-4940-5p

• Accession: MIMAT0020146
• Description: Drosophila melanogaster dme-miR-4940-5p mature miRNA
• Sequence: 23 - UGGCGGAUAUAGAUCAUUGGUU - 44
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4940-3p

• Accession: MIMAT0020147
• Description: Drosophila melanogaster dme-miR-4940-3p mature miRNA
• Sequence: 62 - AACAAGAUUUGUUUCGGCCGCC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215