miRBase entry: bfl-mir-4900a-1

Stem-loop bfl-mir-4900a-1


Accession
MI0017674
Description
Branchiostoma floridae bfl-mir-4900a-1 precursor miRNA


Sequence

gcuaagaguuuuucuuccuuggcacagcucugugacaguggaacaUAGCUGGCUGGCGAAGAAAUGCccuucca
...(((.((.(((((((.(((((.(((((.(((..(...)..))).)))))))))).))))))).)).)))...

Structure
gcu   a  u       c     a     c   ga a 
   aag gu uuucuuc uuggc cagcu ugu  c  
   ||| || ||||||| ||||| ||||| |||  | g
   uuc CG AAAGAAG GGUCG GUCGA aca  g  
acc   c  U       C     -     U   ag u 


Annotation confidence Not enough data
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Genome context
GG666468.1: 2410817-2410890 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from bfl-mir-4900a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4900a

Accession MIMAT0020492
Description Branchiostoma floridae bfl-miR-4900a mature miRNA
Sequence 46 - UAGCUGGCUGGCGAAGAAAUGC - 67
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27