Stem-loop bfl-mir-4890

Accession

MI0017662

Description

Branchiostoma floridae bfl-mir-4890 precursor miRNA

Sequence

cucugugcaguucuauGUGAUUAGCUAAGGUAGCUGAUAccauggcagccaggcuaccagcuccagagcugaucauauggaaggcacaagc
...(((((..((((((((((((((((..((.(((((.((((.(((...))))).)).)))))))..)))))))))))))))).)))))...

Structure

cuc     ag                AA  U     A  -  a   c 
   ugugc  uucuauGUGAUUAGCU  GG AGCUG UA cc ugg  
   |||||  ||||||||||||||||  || ||||| || || ||| a
   acacg  aagguauacuagucga  cc ucgac au gg acc  
cga     -g                ga  -     c  c  -   g 

Annotation confidence Low

Genome context

GG666603.1: 5823503-5823593 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4890

Mature bfl-miR-4890

• Accession: MIMAT0020479
• Description: Branchiostoma floridae bfl-miR-4890 mature miRNA
• Sequence: 17 - GUGAUUAGCUAAGGUAGCUGAUA - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27