miRBase entry: bfl-mir-4879

Stem-loop bfl-mir-4879


Accession
MI0017645
Description
Branchiostoma floridae bfl-mir-4879 precursor miRNA


Sequence

uccagauguUAAACUAUCGUUCUGGGAACAGucgcucuuacaagcuguucccauggagauagcuuagcaacuccu
...((.((((((.(((((.(((((((((((((...........)))))))))).)))))))).)))))).))...

Structure
ucc  a      A     G   -          cgcu 
   ag uguUAA CUAUC UUC UGGGAACAGu    c
   || |||||| ||||| ||| ||||||||||    u
   uc acgauu gauag agg acccuugucg    u
ucc  a      c     -   u          aaca 


Annotation confidence Not enough data
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Genome context
GG666659.1: 638061-638135 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-4879
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4879

Accession MIMAT0020462
Description Branchiostoma floridae bfl-miR-4879 mature miRNA
Sequence 10 - UAAACUAUCGUUCUGGGAACAG - 31
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27