Stem-loop bfl-mir-4872a

Accession

MI0017630

Description

Branchiostoma floridae bfl-mir-4872a precursor miRNA

Gene family

MIPF0001205; mir-4872

Sequence

cuagguucacaugcagUGCCGGGAUAACUAAAACUCUGAguucuguuuacuucagaguuuugguaccccggcuccauauggaacuacu
...(((((.((((..(.((((((...(((((((((((((((.......)).)))))))))))))..)))))).)..)))))))))...

Structure

cua     a    ca U      AUA             -  uc 
   gguuc caug  g GCCGGG   ACUAAAACUCUGA gu  u
   ||||| ||||  | ||||||   ||||||||||||| ||  g
   ucaag guau  c cggccc   ugguuuugagacu ca  u
uca     -    ac u      -ca             u  uu 

Annotation confidence Not enough data

Genome context

GG666674.1: 862903-862990 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-4872a

Mature bfl-miR-4872a

• Accession: MIMAT0020114
• Description: Branchiostoma floridae bfl-miR-4872a mature miRNA
• Sequence: 17 - UGCCGGGAUAACUAAAACUCUGA - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27