Stem-loop bfl-mir-4869

Accession

MI0017626

Description

Branchiostoma floridae bfl-mir-4869 precursor miRNA

Gene family

MIPF0001829; mir-4869

Sequence

uauuuccguuACGAUGUUGACUUCCGCUCCUCUguggugauaucuggacuagaGGGACCUGUAGUCAACACGAGAuggaaccg
...(((((((.((.((((((((.(.(.(((.((.((((.........)))).))))).).).)))))))))).)))))))...

Structure

uau       A  A        U C C   U  g    gau 
   uuccguu CG UGUUGACU C G UCC CU uggu   a
   ||||||| || |||||||| | | ||| || ||||   u
   aagguAG GC ACAACUGA G C AGG Ga auca   c
gcc       A  -        U U C   -  g    ggu 

Annotation confidence Not enough data

Genome context

GG666534.1: 216744-216826 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from bfl-mir-4869

Mature bfl-miR-4869-5p

• Accession: MIMAT0020108
• Description: Branchiostoma floridae bfl-miR-4869-5p mature miRNA
• Sequence: 11 - ACGAUGUUGACUUCCGCUCCUCU - 33
• Evidence: experimental ; 454 [1]

Mature bfl-miR-4869-3p

• Accession: MIMAT0020109
• Description: Branchiostoma floridae bfl-miR-4869-3p mature miRNA
• Sequence: 54 - GGGACCUGUAGUCAACACGAGA - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27