miRBase entry: bfl-mir-4862

Stem-loop bfl-mir-4862


Accession
MI0017615
Description
Branchiostoma floridae bfl-mir-4862 precursor miRNA


Sequence

cugaucACGCGUUUAUGUCUGCGCCUGUcuacuguuaaacacAGGUACAGGCAUAAACUCGAGAuuau
.(((((.((.(((((((((((.((((((............)))))).))))))))))).)).))))).

Structure
c     A  C           C      cuacu 
 ugauc CG GUUUAUGUCUG GCCUGU     g
 ||||| || ||||||||||| ||||||      
 auuAG GC CAAAUACGGAC UGGAca     u
u     A  U           A      caaau 


Annotation confidence Not enough data
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Genome context
GG666534.1: 218827-218894 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from bfl-mir-4862
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4862-5p

Accession MIMAT0020091
Description Branchiostoma floridae bfl-miR-4862-5p mature miRNA
Sequence 7 - ACGCGUUUAUGUCUGCGCCUGU - 28
Evidence experimental
454 [1]

Mature bfl-miR-4862b*

Accession MIMAT0020092
Description Branchiostoma floridae bfl-miR-4862b* mature miRNA
Sequence 43 - AGGUACAGGCAUAAACUCGAGA - 64
Evidence

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27