miRBase entry: bfl-mir-4857

Stem-loop bfl-mir-4857


Accession
MI0017610
Description
Branchiostoma floridae bfl-mir-4857 precursor miRNA


Sequence

ccguggucACGAUGUUUUUGUCUGCUCCAGAggugaguuauuacgacuuugggacagacgaaacaucucagaccaacg
.(((((((..((((((((.(((((.(((((((((((....))))..))))))).)))))))))))))...)))).)))

Structure
c   -    -AC        U     C       --    g 
 cgu gguc   GAUGUUUU GUCUG UCCAGAg  guga u
 ||| ||||   |||||||| ||||| |||||||  ||||  
 gca ccag   cuacaaag cagac ggguuuc  cauu u
-   a    acu        -     a       ag    a 


Annotation confidence Not enough data
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Genome context
GG666534.1: 217921-217998 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from bfl-mir-4857
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4857

Accession MIMAT0020083
Description Branchiostoma floridae bfl-miR-4857 mature miRNA
Sequence 9 - ACGAUGUUUUUGUCUGCUCCAGA - 31
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27