Stem-loop bfl-mir-182b

Accession

MI0017608

Description

Branchiostoma floridae bfl-mir-182b precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

ggacuaguuuucuuggcacuugaggaauucucuguuugguugcauguaaugugcaucuuuaugguaucaCAGAAUUCCCCAGUACCAAGGAAacuggguu
...(((((((((((((.(((.(.((((((((((((..((.(((((.....))))).))..))))......))))))))).))).)))))))))))))...

Structure

gga             c   u a        ------    uu  u     g 
   cuaguuuucuugg acu g ggaauucu      cugu  gg ugcau u
   ||||||||||||| ||| | ||||||||      ||||  || ||||| a
   ggucaAAGGAACC UGA C CCUUAAGA      ggua  uc acgug a
uug             A   C -        Cacuau    uu  u     u 

Annotation confidence Not enough data

Genome context

GG666785.1: 120014-120113 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-182b

Mature bfl-miR-182b-3p

• Accession: MIMAT0020081
• Description: Branchiostoma floridae bfl-miR-182b-3p mature miRNA
• Sequence: 70 - CAGAAUUCCCCAGUACCAAGGAA - 92
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27