Stem-loop sko-mir-4826

Accession

MI0017564

Description

Saccoglossus kowalevskii sko-mir-4826 precursor miRNA

Sequence

gcaaaguuguugcuacuggcCAUCCGAUAACAAGUGUUGGAUauggaaucaagcacgaaUCCAACACUUCAAAUCGGAUCGUcgguagcgaugucaaacua
....((((((((((((((((.(((((((...(((((((((((.((..........)).)))))))))))...))))))).))))))))))))....)))).

Structure

gcaa    ----            C       AAC           a  gaau 
    aguu    guugcuacuggc AUCCGAU   AAGUGUUGGAU ug    c
    ||||    |||||||||||| |||||||   ||||||||||| ||     
    ucaa    uagcgauggcUG UAGGCUA   UUCACAACCUa gc    a
---a    acug            C       AAC           a  acga 

Annotation confidence Not enough data

Genome context

GL011565.1: 19751-19851 [+]

Mature sko-miR-4826-5p

• Accession: MIMAT0020032
• Description: Saccoglossus kowalevskii sko-miR-4826-5p mature miRNA
• Sequence: 21 - CAUCCGAUAACAAGUGUUGGAU - 42
• Evidence: experimental ; 454 [1]

Mature sko-miR-4826-3p

• Accession: MIMAT0020033
• Description: Saccoglossus kowalevskii sko-miR-4826-3p mature miRNA
• Sequence: 60 - UCCAACACUUCAAAUCGGAUCGU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27