Stem-loop tcc-MIR319

Accession

MI0017502

Description

Theobroma cacao tcc-MIR319 precursor miRNA

Literature search

0 open access papers mention tcc-MIR319
(0 sentences)

Sequence

ugagaaauaauuagaagugggggcuccuuucagccuaaaacagcuucaagauuuuggucuuguggccuaucuaagcucuucuugauauuugcUUUGGACUGAAGGGAGCUCCUaauucuuuauuuucuccggu
.((((((.....((((.((((((((((((((((.(((((.(((..((((((....((((....))))............))))))...))).))))).)))))))))))))))).))))....))))))....

Structure

---u      uaauu    g                c     a   -cu      --------uuuu    u 
    gagaaa     agaa ugggggcuccuuucag cuaaa cag   ucaaga            gguc u
    ||||||     |||| |||||||||||||||| ||||| |||   ||||||            ||||  
    cucuuu     ucuu aUCCUCGAGGGAAGUC GGUUU guu   aguucu            ccgg g
uggc      -uauu    a                A     c   uau      ucucgaaucuau    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR319

• Accession: MIMAT0020418
• Description: Theobroma cacao tcc-miR319 mature miRNA
• Sequence: 93 - UUUGGACUGAAGGGAGCUCCU - 113
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108