Stem-loop tcc-MIR169g

Accession

MI0017481

Description

Theobroma cacao tcc-MIR169g precursor miRNA

Sequence

gauaaagagucuuuguuuggUAGCCAGGGAUGACUUGCCUAcggcuuuucaggugguuaauauugaugcuaugauuaugaauguaaaaccccuggcucuggucugcaggcagucaccuuggcuaugcuaacaggcucuuuucuc
((.(((((((((..(((..((((((((((.(((((.((((.(((((..(((((.((((.(((((.(((.......))).)))))..)))))))))....)).))).)))))))))))))))))))...))))))))))))))..

Structure

--  u         uu   -ug          A     U    A   -  --uu     u    -a     g   cu 
  ga aaagagucu  guu   gUAGCCAGGG UGACU GCCU cgg cu    ucagg gguu  auauu aug  a
  || |||||||||  |||   |||||||||| ||||| |||| ||| ||    ||||| ||||  ||||| |||  u
  cu uuucucgga  caa   uaucgguucc acuga cgga guc gg    ggucc ccaa  uguaa uau  g
cu  -         --   ucg          -     -    c   u  ucuc     -    aa     g   ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR169g

• Accession: MIMAT0020397
• Description: Theobroma cacao tcc-miR169g mature miRNA
• Sequence: 21 - UAGCCAGGGAUGACUUGCCUA - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108