Stem-loop tcc-MIR167a

Accession

MI0017471

Description

Theobroma cacao tcc-MIR167a precursor miRNA

Sequence

gccgugcacccacuagcaguUGAAGCUGCCAGCAUGAUCUAaacuuccuucucugucgagaggauagauuggaucaugugguagcuucaccuguuguugggaucacgaaga
..((((..((((.((((((.(((((((((((.((((((((((.((..((((((....))))))..)).))))))))))))))))))))).)))))).))))..))))....

Structure

--gc    ca    c      u           G          a  uc      u 
    cgug  ccca uagcag UGAAGCUGCCA CAUGAUCUAa cu  cuucuc g
    ||||  |||| |||||| ||||||||||| |||||||||| ||  ||||||  
    gcac  gggu guuguc acuucgauggu guacuagguu ga  ggagag u
agaa    ua    u      c           -          a  ua      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR167a

• Accession: MIMAT0020387
• Description: Theobroma cacao tcc-miR167a mature miRNA
• Sequence: 21 - UGAAGCUGCCAGCAUGAUCUA - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108