miRBase entry: mmu-mir-3960

Stem-loop mmu-mir-3960


Accession
MI0016963
Symbol
MGI: Mir3960
Description
Mus musculus mmu-mir-3960 precursor miRNA

Literature search
8 open access papers mention mmu-mir-3960
(10 sentences)

Sequence

3 reads, 1 reads per million, 3 experiments
gccacggcuuccugcgcccccgaucggggccgccaacagcgcuggcGGCGGCGGCGGAGGCGGGGGcaguggc
(((((.((((((...(((.(((.(((..(((((((.......)))))))..)))))).))))))))).)))))

Structure
     g      ugc   c   a   gg       ac 
gccac gcuucc   gcc ccg ucg  gccgcca  a
||||| ||||||   ||| ||| |||  |||||||  g
cggug cGGGGG   CGG GGC GGC  CGGcggu  c
     a      ---   A   -   GG       cg 


Annotation confidence Not enough data
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Genome context
chr2: 32712900-32712972 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-3960
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-3960

Accession MIMAT0019336
Description Mus musculus mmu-miR-3960 mature miRNA
Sequence 47 - GGCGGCGGCGGAGGCGGGGG - 66
Evidence experimental
cloned [1]

References

  1. PubMed ID: 21324897
    A Runx2/miR-3960/miR-2861 regulatory feedback loop during mouse osteoblast differentiation
    "Hu R, Liu W, Li H, Yang L, Chen C, Xia ZY, Guo LJ, Xie H, Zhou HD, Wu XP, Luo XH"
    "J Biol Chem (2011) 286:12328-12339