Stem-loop oar-mir-376d

Accession

MI0016934

Description

Ovis aries oar-mir-376d precursor miRNA

Sequence

16813 reads, 133.0 reads per million, 128 experiments

gggauccauccuguuugguauuuaaaagGUAGAUUUUCCUUCUAUGGUUacggguuuggugauuaAUCAUAGAGGAAAAUCCACAUuuucaguaucaaaugcugcuuugg
((((....))))((((((((((.((((.((.(((((((((.(((((((((...(((....))))))))))))))))))))).)).)))).))))))))))..........

Structure

gggauccauccu          u    g  A         U         cgg   u 
            guuugguauu aaaa GU GAUUUUCCU CUAUGGUUa   guu g
            |||||||||| |||| || ||||||||| |||||||||   |||  
            uaaacuauga uuuU CA CUAAAAGGA GAUACUAau   uag g
--gguuucgucg          c    A  C         -         ---   u 

Annotation confidence High

Genome context

chr18: 64538218-64538327 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from oar-mir-376d

Mature oar-miR-376d-5p

• Accession: MIMAT0052513
• Description: Ovis aries oar-miR-376d-5p mature miRNA
• Sequence: 29 - GUAGAUUUUCCUUCUAUGGUU - 49
• Evidence: experimental ; Illumina [1]

Mature oar-miR-376d-3p

• Accession: MIMAT0019281
• Description: Ovis aries oar-miR-376d-3p mature miRNA
• Sequence: 66 - AUCAUAGAGGAAAAUCCACAU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662