Stem-loop far-MIR1119

Accession

MI0016606

Description

Festuca arundinacea far-MIR1119 precursor miRNA

Sequence

ccagcgagugagcucgcgagcgcggaggagcuggcucagcggcucagcgccucaugccagccgugccacgguggcagucggucguguguacuccuacgUGGCACGGCGUGAUGCUUAGUCAGccagcagaguggagugcuacuuuu
...((((.(((((((((....(((((((.(((((((....))).)))).)))).)))..(((((((((((..((.(((((......)).)))))..))))))))))))))).))))).)).))....(((((((....))))))).

Structure

--------------------cca  -  g     -    gagcgcggaggagcuggcucagcggcucagcgccucaugcca           gu  c   -  gu 
                       gc ga ugagc ucgc                                          gccgugccacg  gg agu cg  c
                       || || ||||| ||||                                          |||||||||||  || ||| ||   
                       cG CU AUUCG AGUG                                          CGGCACGGUgc  cc uca gu  g
uuuucaucgugaggugagacgac  A  G     U    ------------------------------------------           au  -   u  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR1119

• Accession: MIMAT0018365
• Description: Festuca arundinacea far-miR1119 mature miRNA
• Sequence: 99 - UGGCACGGCGUGAUGCUUAGUCAG - 122
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413