Stem-loop tca-mir-3819

Accession

MI0016406

Description

Tribolium castaneum tca-mir-3819 precursor miRNA

Sequence

agcuaggaagcuaacagguAAUUCGUAUUAAUAUUCCAuuuaguucuggagcaaggcucuauucuuauguaaaauuauuauuuguuuuugauguaaaaaugcuuccacuaa
.....((((((.((((((((((..(.(((((........))))).)((((((...))))))...............))))))))))..............)))))).....

Structure

agcua      -------------u          ----------------------------UC U     UAU 
     ggaagc              aacagguAAU                              G AUUAA   U
     ||||||              ||||||||||                              | |||||    
     ccuucg              uuguuuauua                              c ugauu   C
aauca      uaaaaauguaguuu          uuaaaauguauucuuaucucggaacgaggu u     uAC 

Annotation confidence Not enough data

Genome context

ChLG4: 9708729-9708839 [-]

Mature tca-miR-3819-5p

• Accession: MIMAT0018914
• Description: Tribolium castaneum tca-miR-3819-5p mature miRNA
• Sequence: 20 - AAUUCGUAUUAAUAUUCCA - 38
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696