Stem-loop tca-mir-3901

Accession

MI0016401

Description

Tribolium castaneum tca-mir-3901 precursor miRNA

Sequence

cuuaugugcuaagCAUUUUGAUUUUAUGAGUCaaaaaucuaauaaaacgauauuuguaauaaauugacuucguuaucuuuguauuuuuuauuauuuuuuCAUUUAUAUUUCAAUUACGUuuucacuaaau
.....(((..((((...((((...(((((((.(((((..((((((((.(((((..(((((...........)))))....))))))))))))).))))).)))))))..))))....)))).))).....

Structure

cuuau   cu    -AUU    UUU       C     uc        c     --uu     aaau 
     gug  aagC    UUGA   UAUGAGU aaaaa  uaauaaaa gauau    guaau    u
     |||  ||||    ||||   ||||||| |||||  |||||||| |||||    |||||    g
     cac  uuUG    AACU   AUAUUUA uuuuu  auuauuuu uuaug    uauug    a
uaaau   -u    CAUU    -UU       C     -u        -     uuuc     cuuc 

Annotation confidence Not enough data

Genome context

ChLG9: 12320608-12320737 [-]

Mature tca-miR-3901-5p

• Accession: MIMAT0018906
• Description: Tribolium castaneum tca-miR-3901-5p mature miRNA
• Sequence: 14 - CAUUUUGAUUUUAUGAGUC - 32
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3901-3p

• Accession: MIMAT0018907
• Description: Tribolium castaneum tca-miR-3901-3p mature miRNA
• Sequence: 100 - CAUUUAUAUUUCAAUUACGU - 119
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696