Stem-loop tca-mir-3791

Accession

MI0016389

Description

Tribolium castaneum tca-mir-3791 precursor miRNA

Sequence

aucaaguuaaacguuCGGUGGUUUUAUUACGGUGGUUGCGauuuuuacaaUCACCGGGUAGAAAUCAUCUcauguuuaaccaaau
.....(((((((((..(((((((((....(((((((((.........)))))))))....)))))))))..))))))))).....

Structure

aucaa         uC         AUUA         CGa 
     guuaaacgu  GGUGGUUUU    CGGUGGUUG   u
     |||||||||  |||||||||    |||||||||   u
     caauuugua  CUACUAAAG    GCCACUaac   u
uaaac         cU         AUGG         auu 

Annotation confidence Not enough data

Genome context

ChLG5: 7175867-7175951 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from tca-mir-3791

Mature tca-miR-3791-5p

• Accession: MIMAT0018882
• Description: Tribolium castaneum tca-miR-3791-5p mature miRNA
• Sequence: 16 - CGGUGGUUUUAUUACGGUGGUUGCG - 40
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3791-3p

• Accession: MIMAT0018883
• Description: Tribolium castaneum tca-miR-3791-3p mature miRNA
• Sequence: 51 - UCACCGGGUAGAAAUCAUCU - 70
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696