Stem-loop tca-mir-3891

Accession

MI0016388

Description

Tribolium castaneum tca-mir-3891 precursor miRNA

Sequence

ucggagaugCAGAGGUUAAUGUGUCGUAAAacacuuacuguaauaaaaguuaauaaaauguguguAGUGUAAAUACCUCACCGCaucaacca
..((.(((((.(((((.....((.((....((((......((((....)))).......))))....))))...)))))...)))))..)).

Structure

uc  -a     --A     UAAUG  U  UAAA    -uuacug    a 
  gg  gaugC   GAGGU     UG CG    acac       uaau a
  ||  |||||   |||||     || ||    ||||       ||||  
  cc  cuaCG   CUCCA     AU GU    ugug       auug a
-a  aa     CCA     --UAA  -  GAug    uaaaaua    a 

Annotation confidence Not enough data

Genome context

ChLG3: 3317398-3317489 [-]

Mature tca-miR-3891-5p

• Accession: MIMAT0018880
• Description: Tribolium castaneum tca-miR-3891-5p mature miRNA
• Sequence: 10 - CAGAGGUUAAUGUGUCGUAAA - 30
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3891-3p

• Accession: MIMAT0018881
• Description: Tribolium castaneum tca-miR-3891-3p mature miRNA
• Sequence: 66 - AGUGUAAAUACCUCACCGC - 84
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696