Accession
MI0016386
Description
Tribolium castaneum
tca-mir-3889 precursor miRNA
Sequence
uguaauaaacucacaaaaugcgACUUGUUCUCUCUGUAUUGUGUGgaguugcucaUAGUACGGAUUGAACACGUCGCuguuuuugaguuuacgcuu
.....((((((((.(((..(((((.(((((..(((((((((((.(......).)))))))))))..))))).)))))..))).)))))))).....
.....((((((((.(((..(((((.(((((..(((((((((((.(......).)))))))))))..))))).)))))..))).)))))))).....
Structure
uguaa c au U UC U ga
uaaacuca aaa gcgAC UGUUC UCUGUAUUGUG G g
|||||||| ||| ||||| ||||| ||||||||||| |
auuugagu uuu CGCUG ACAAG AGGCAUGAUac c u
uucgc u gu C UU u gu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
ChLG3: 15203725-15203820 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from tca-mir-3889
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tca-miR-3889-5p
| Accession | MIMAT0018876 |
| Description | Tribolium castaneum tca-miR-3889-5p mature miRNA |
| Sequence | 23 - ACUUGUUCUCUCUGUAUUGUGUG - 45 |
| Evidence |
experimental
SOLID [1] |
Mature tca-miR-3889-3p
| Accession | MIMAT0018877 |
| Description | Tribolium castaneum tca-miR-3889-3p mature miRNA |
| Sequence | 56 - UAGUACGGAUUGAACACGUCGC - 77 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
References
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