Stem-loop tca-mir-3878

Accession

MI0016372

Description

Tribolium castaneum tca-mir-3878 precursor miRNA

Sequence

ugauagguguggUGGACGGAGAACUAAUUGUauuaaaauugcuaccuacuugcuucgauuugaaAUUUUUAGUGUCCGUGUUGuuauca
.....((((....(.(((((..(((((..((.(((((...((.........)).....))))).))..))))).))))).)...)))).

Structure

ugaua    uggU G     GA     UU  a     --auu  uac 
     ggug    G ACGGA  ACUAA  GU uuaaa     gc   c
     ||||    | |||||  |||||  || |||||     ||   u
     cuau    U UGCCU  UGAUU  UA aguuu     cg   a
----a    -uGU G     -G     UU  a     agcuu  uuc 

Annotation confidence Not enough data

Genome context

ChLG4: 7036532-7036620 [+]

Mature tca-miR-3878-5p

• Accession: MIMAT0018848
• Description: Tribolium castaneum tca-miR-3878-5p mature miRNA
• Sequence: 13 - UGGACGGAGAACUAAUUGU - 31
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3878-3p

• Accession: MIMAT0018849
• Description: Tribolium castaneum tca-miR-3878-3p mature miRNA
• Sequence: 65 - AUUUUUAGUGUCCGUGUUG - 83
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696