Stem-loop tca-mir-3875

Accession

MI0016369

Description

Tribolium castaneum tca-mir-3875 precursor miRNA

Sequence

cacuuGCGUCUUUAGCUCAAUAAAuauuagaggugcuuuauuugggccaaUAUUUGCGCUAGAUAGCGCguauu
.....((((.((((((.(((...(((((...(((.(.......).))))))))))).))))))..)))).....

Structure

cacuu    -C      U   UAA     aga   g uu 
     GCGU  UUUAGC CAA   Auauu   ggu c  u
     ||||  |||||| |||   |||||   ||| |  a
     CGCG  AGAUCG GUU   UAUaa   ccg g  u
uuaug    AU      C   ---     ---   g uu 

Annotation confidence Not enough data

Genome context

ChLG8: 7779290-7779363 [-]

Mature tca-miR-3875-5p

• Accession: MIMAT0018842
• Description: Tribolium castaneum tca-miR-3875-5p mature miRNA
• Sequence: 6 - GCGUCUUUAGCUCAAUAAA - 24
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3875-3p

• Accession: MIMAT0018843
• Description: Tribolium castaneum tca-miR-3875-3p mature miRNA
• Sequence: 51 - UAUUUGCGCUAGAUAGCGC - 69
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696