Stem-loop tca-mir-3873

Accession

MI0016367

Description

Tribolium castaneum tca-mir-3873 precursor miRNA

Sequence

uuauuaguuguuGCCGAAUGUUAUAAGGUUugcauucguuaggaauauauuaauuguuaaaacgaaaauccaaauaaauuguucuugaAUGUAAUUUUAGCUCAUAAUuguaauaauuuaacc
.....(((((((((...(((...(((((((.(((((((...((((((..(((.(((..............))).)))..))))))))))))))))))))...)))....))))))))).....

Structure

uuauu         -CGA   UUA       u       uua      ua   a   uuaaaa 
     aguuguuGC    AUG   UAAGGUU gcauucg   ggaaua  uua uug      c
     |||||||||    |||   ||||||| |||||||   ||||||  ||| |||       
     uuaauaaug    UAC   AUUUUAA UGUAagu   ucuugu  aau aac      g
ccaau         uUAA   UCG       -       ---      ua   a   cuaaaa 

Annotation confidence Not enough data

Genome context

ChLG7: 4215103-4215225 [-]

Mature tca-miR-3873-5p

• Accession: MIMAT0018838
• Description: Tribolium castaneum tca-miR-3873-5p mature miRNA
• Sequence: 13 - GCCGAAUGUUAUAAGGUU - 30
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3873-3p

• Accession: MIMAT0018839
• Description: Tribolium castaneum tca-miR-3873-3p mature miRNA
• Sequence: 89 - AUGUAAUUUUAGCUCAUAAU - 108
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696