Stem-loop tca-mir-3872

Accession

MI0016366

Description

Tribolium castaneum tca-mir-3872 precursor miRNA

Sequence

gUGAAGUGAUCUACAGCCAGAAAUGCAuuauuaugcucugcgaaguaagugcauaucuuaauuuuUGCAUUUUUUACUAAUUGUUCAUGCUca
.(((.((((.(...((..((((((((((((.(((((.((........)).)))))...)))....)))))))))..))....).))))..)))

Structure

g   -A    U -UAC  CC         ----   --u     u  gcg 
 UGA  GUGA C    AG  AGAAAUGCA    uua   uaugc cu   a
 |||  |||| |    ||  |||||||||    |||   ||||| ||    
 acU  UACU G    UC  UUUUUACGU    aau   auacg ga   a
-   CG    U UUAA  AU         uuuu   ucu     u  aug 

Annotation confidence Not enough data

Genome context

ChLG7: 14554402-14554494 [+]

Mature tca-miR-3872-5p

• Accession: MIMAT0018836
• Description: Tribolium castaneum tca-miR-3872-5p mature miRNA
• Sequence: 2 - UGAAGUGAUCUACAGCCAGAAAUGCA - 27
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3872-3p

• Accession: MIMAT0018837
• Description: Tribolium castaneum tca-miR-3872-3p mature miRNA
• Sequence: 66 - UGCAUUUUUUACUAAUUGUUCAUGCU - 91
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696