Stem-loop tca-mir-3871

Accession

MI0016365

Description

Tribolium castaneum tca-mir-3871 precursor miRNA

Sequence

aucccacaaucccGAUUUCUGCCUUGUGCCGCucccuccuaauucccgcCACAUUUGCCUAAUCGGGCaugucccac
.....(((..(((((((...((..((((.((...............)).))))...))..)))))))..))).....

Structure

auccc   au       UCU  -CU    C  Cucccu 
     aca  cccGAUU   GC   UGUG CG      c
     |||  |||||||   ||   |||| ||      c
     ugu  GGGCUAA   CG   ACAC gc      u
caccc   aC       -UC  UUU    c  ccuuaa 

Annotation confidence Low

Genome context

ChLG7: 2082059-2082135 [+]

Mature tca-miR-3871-5p

• Accession: MIMAT0018834
• Description: Tribolium castaneum tca-miR-3871-5p mature miRNA
• Sequence: 14 - GAUUUCUGCCUUGUGCCGC - 32
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3871-3p

• Accession: MIMAT0018835
• Description: Tribolium castaneum tca-miR-3871-3p mature miRNA
• Sequence: 50 - CACAUUUGCCUAAUCGGGC - 68
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696