Stem-loop tca-mir-989

Accession

MI0016359

Description

Tribolium castaneum tca-mir-989 precursor miRNA

Literature search

1 open access papers mention tca-mir-989
(1 sentences)

Sequence

uuuuugcucccaagguccCGCCACUAGGUCGCAUAACACgcauugucaacaccgUGUGAUGUGACGUAGUGGuaugucuaggggaguugccu
.....((((((..((.(..(((((((.(((((((.(((((...((....)).))))).))))))).)))))))..).))..)))))).....

Structure

uuuuu      aa  u cC       G       A     cau  u 
     gcuccc  gg c  GCCACUA GUCGCAU ACACg   ug c
     ||||||  || |  ||||||| ||||||| |||||   ||  
     ugaggg  uc g  uGGUGAU CAGUGUA UGUgc   ac a
uccgu      ga  u ua       G       G     --c  a 

Annotation confidence Not enough data

Genome context

ChLG4: 193393-193484 [+]

Mature tca-miR-989-5p

• Accession: MIMAT0018822
• Description: Tribolium castaneum tca-miR-989-5p mature miRNA
• Sequence: 19 - CGCCACUAGGUCGCAUAACAC - 39
• Evidence: experimental ; SOLID [1]

Mature tca-miR-989-3p

• Accession: MIMAT0018823
• Description: Tribolium castaneum tca-miR-989-3p mature miRNA
• Sequence: 55 - UGUGAUGUGACGUAGUGG - 72
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696